Objective
Stub page for BAGEL workflows that design binders against intrinsically disordered regions (IDRs). Content is intentionally limited to source mapping for now.Source scripts
bagel/scripts/technical-report/disordered/asyn.pybagel/scripts/technical-report/disordered/cd28.pybagel/scripts/technical-report/disordered/p53.pybagel/scripts/technical-report/disordered/sumo1.py
Current status
- Status:
Stub - Expansion state: planned
Known dependencies
- BAGEL (
biobagel) installation - Oracle backend: Modal or local GPU
- Structure-based terms (for target + binder states)
- Multi-state optimization setup for selectivity workflows
Expansion checklist
- Add one canonical IDR binder script walkthrough
- Add multi-state setup example (target/off-target)
- Add output interpretation for confidence and interface terms
- Add reproducibility notes (stochastic optimization)